mitochondrial DNA

THCTHC Posts: 525
edited October 2007 in A Moving Train
Very interesting stuff...

what do people on here know about it?

seems to be opening up a lot of scientific discussion.....
“Kept in a small bowl, the goldfish will remain small. With more space, the fish can grow double, triple, or quadruple its size.”
-Big Fish
Post edited by Unknown User on

Comments

  • AhnimusAhnimus Posts: 10,560
    I have to admit, biology is one of my weaker links. I have two friends with biology textbooks, I'm gonna steal one after I finish Gray's Pscyhology. I didn't think mitochondria was a type of DNA, I thought it was a feature of some cell bodies, is that the reference?
    I necessarily have the passion for writing this, and you have the passion for condemning me; both of us are equally fools, equally the toys of destiny. Your nature is to do harm, mine is to love truth, and to make it public in spite of you. - Voltaire
  • chopitdownchopitdown Posts: 2,222
    Ahnimus wrote:
    I have to admit, biology is one of my weaker links. I have two friends with biology textbooks, I'm gonna steal one after I finish Gray's Pscyhology. I didn't think mitochondria was a type of DNA, I thought it was a feature of some cell bodies, is that the reference?

    mitochondria have dna (hence mitochondralDNA) since they are a living cell / organism. that's all I've got
    make sure the fortune that you seek...is the fortune that you need
  • AhnimusAhnimus Posts: 10,560
    chopitdown wrote:
    mitochondria have dna (hence mitochondralDNA) since they are a living cell / organism. that's all I've got

    I've heard it a billion times in those HHMI lectures. But, I didn't retain it, I'm mostly interested in nerve cells and synapses though.

    Here is an article from HHMI http://www.hhmi.org/bulletin/may2006/pdf/Mitochondria.pdf

    The Powerhouse of the Cell
    I necessarily have the passion for writing this, and you have the passion for condemning me; both of us are equally fools, equally the toys of destiny. Your nature is to do harm, mine is to love truth, and to make it public in spite of you. - Voltaire
  • chopitdownchopitdown Posts: 2,222
    Ahnimus wrote:
    I've heard it a billion times in those HHMI lectures. But, I didn't retain it, I'm mostly interested in nerve cells and synapses though.

    Here is an article from HHMI http://www.hhmi.org/bulletin/may2006/pdf/Mitochondria.pdf

    The Powerhouse of the Cell

    i should have said that's all i've got in regards to mitochondralDNA. I've got a basic understanding of mitochondria; and I'm happy to keep it at a basic understanding :)
    make sure the fortune that you seek...is the fortune that you need
  • AhnimusAhnimus Posts: 10,560
    chopitdown wrote:
    i should have said that's all i've got in regards to mitochondralDNA. I've got a basic understanding of mitochondria; and I'm happy to keep it at a basic understanding :)

    It's hard to find something on it exactly

    Luis Brieba de Castro, a newly named HHMI international research scholar, is working to understand how the DNA that is found outside the nucleus of cells produces proteins. That DNA, called mitochondrial DNA, is found in small cellular structures called mitochondria. Mutations in mitochondrial DNA have been linked to several inherited medical conditions, including some forms of hearing and vision loss.


    Scientists know that mitochondrial DNA is inherited only from the mother, but they do not yet fully understand the basic mechanisms of nucleic acid metabolism and how DNA damage is linked to diseases. Brieba de Castro hopes to find answers that could lead to genetic interventions to correct certain inherited disorders. Following previous studies of DNA replication in bacteriophage, a type of virus that infects bacteria, he is working in the yeast Saccharomyces cerevisiae to explore how DNA functions in the mitochondria.

    http://www.hhmi.org/news/20061101a.html

    There is also something about tracing our ancestry through it.
    I necessarily have the passion for writing this, and you have the passion for condemning me; both of us are equally fools, equally the toys of destiny. Your nature is to do harm, mine is to love truth, and to make it public in spite of you. - Voltaire
  • THCTHC Posts: 525
    Ahnimus wrote:
    There is also something about tracing our ancestry through it.


    the stuff about tracing ancestry is the really cool part. i saw a bit on this on 20/20 the other day. Its interesting though...one of their points was that if you go back say 8 generations...of your own DNA...you'd have something like 24,000 grandparents or something crazy. Which means...our genes..are very much a combination of many...many gene pools...from all over the globe.
    “Kept in a small bowl, the goldfish will remain small. With more space, the fish can grow double, triple, or quadruple its size.”
    -Big Fish
  • AhnimusAhnimus Posts: 10,560
    THC wrote:
    the stuff about tracing ancestry is the really cool part. i saw a bit on this on 20/20 the other day. Its interesting though...one of their points was that if you go back say 8 generations...of your own DNA...you'd have something like 24,000 grandparents or something crazy. Which means...our genes..are very much a combination of many...many gene pools...from all over the globe.

    So the redneck claim "My mother's my sister" isn't too far off ;)

    Doesn't evolution suggest that all species share a common ancestry?

    Lucy I'm home!!! mmmm Australopithecusafarensis!

    Wait, how many days did it take God to create the universe?
    I necessarily have the passion for writing this, and you have the passion for condemning me; both of us are equally fools, equally the toys of destiny. Your nature is to do harm, mine is to love truth, and to make it public in spite of you. - Voltaire
  • tybirdtybird Posts: 17,388
    Ahnimus wrote:
    So the redneck claim "My mother's my sister" isn't too far off ;)

    Doesn't evolution suggest that all species share a common ancestry?
    No, it's my wife is my sister...silly.

    Yes, according to evolution, we all share a distant (very distant as in a long time ago) common ancestor.
    All the world will be your enemy, Prince with a thousand enemies, and whenever they catch you, they will kill you. But first they must catch you, digger, listener, runner, prince with the swift warning. Be cunning and full of tricks and your people shall never be destroyed.
  • tybird wrote:
    No, it's my wife is my sister...silly.

    Yes, according to evolution, we all share a distant (very distant as in a long time ago) common ancestor.
    I wonder if his name is Adam.
    "When you're climbing to the top, you'd better know the way back down" MSB
  • "Almost unconsciously he traced with his finger in the dust on the table: 2+2=5" 1984
  • luvisatowerluvisatower Posts: 1,078
    chopitdown wrote:
    mitochondria have dna (hence mitochondralDNA) since they are a living cell / organism. that's all I've got
    Mitochondria are NOT organisms/cells. Mitochondria are organelles within cells, they produce energy in the form of ATP to power the cell's activities.
    Mitochondria have their own DNA, it is circular in arrangement and similar to that in prokaryotes (bacteria).. It is thought that eukaryotic cells arose from an endosymbiotic relationship between mitochondria and other prokaryotic cells.
    There is a distinct evolutionary connection between mitochondrial DNA across species. Additionaly, it is beleived that all human mitochondrial DNA is passed from mother to offspring since egg cells have mitochondria and sperm do not and that all mitochondrial DNA originated from a single female known as mitochondrial Eve.

    Anything else you'd like to know?
    Just ask
    Peace,
    luv
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    Get it now, get enough, before its gone, let's everybody carry on, carry on....
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    www.wishlistfoundation.org
    WE WANT YOU!!!!
    join the street team
    http://wishlistfoundation.fancorps.com

    "headphones are highly recommended...." Jeff Ament
  • Vedd HeddVedd Hedd Posts: 4,606
    luvistower wrote:
    Mitochondria are NOT organisms/cells. Mitochondria are organelles within cells, they produce energy in the form of ATP to power the cell's activities.
    Mitochondria have their own DNA, it is circular in arrangement and similar to that in prokaryotes (bacteria).. It is thought that eukaryotic cells arose from an endosymbiotic relationship between mitochondria and other prokaryotic cells.
    There is a distinct evolutionary connection between mitochondrial DNA across species. Additionaly, it is beleived that all human mitochondrial DNA is passed from mother to offspring since egg cells have mitochondria and sperm do not and that all mitochondrial DNA originated from a single female known as mitochondrial Eve.

    Anything else you'd like to know?
    Just ask
    Peace,
    luv

    I was going to point this out....well, SOME of it anyway.:D

    Especially your first sentence.
    Turn this anger into
    Nuclear fission
  • What luvistower said. The theory of aquisition of organelles by endocytosis has been around for a long time now. The chloroplasts found in plant cells also thought to be decended from prokaryotic symbionts. There are other ineteresting examples of intracellular symbionts living in eukaryotic cells that look like they might be headed down the path of evolving into organelles. Some corals, for example, harbour nitrogen fixing bacteria inside their cells.

    The important thing about mitochondiral DNA from out point of view is the way in which it is inherited. We're all taught that our DNA is 50% from our father and 50% from our mother, but that's not exactly true. We get all our mitochondrial DNA from our mothers, because sperm do not contribute any mitochondria when the egg is fertilised. This has applications in forensics etc as well, as mitochnidrial DNA can be used to trace maternal lines. I've noticed that they also like to throw the term 'mitochondrial DNA' randomly into lab scenes on crap shows like CSI and law and order.
    It doesn't matter if you're male, female, or confused; black, white, brown, red, green, yellow; gay, lesbian; redneck cop, stoned; ugly; military style, doggy style; fat, rich or poor; vegetarian or cannibal; bum, hippie, virgin; famous or drunk-you're either an asshole or you're not!

    -C Addison
  • AhnimusAhnimus Posts: 10,560
    So, what do you call the DNA from the cell body that isn't mitochondrial DNA, is it cellular DNA?

    That is 50/50 mother/father, correct?

    Endocytosis, that is the process whereby a cell membrane absorbs molecules? As in when neurotransmitters are released by the presynaptic cell and absorbed into the receptors of the postsynaptic cell, the process is endocytosis, correct?
    I necessarily have the passion for writing this, and you have the passion for condemning me; both of us are equally fools, equally the toys of destiny. Your nature is to do harm, mine is to love truth, and to make it public in spite of you. - Voltaire
  • JeanieJeanie Posts: 9,446
    Scubascott wrote:
    What luvistower said. The theory of aquisition of organelles by endocytosis has been around for a long time now. The chloroplasts found in plant cells also thought to be decended from prokaryotic symbionts. There are other ineteresting examples of intracellular symbionts living in eukaryotic cells that look like they might be headed down the path of evolving into organelles. Some corals, for example, harbour nitrogen fixing bacteria inside their cells.

    The important thing about mitochondiral DNA from out point of view is the way in which it is inherited. We're all taught that our DNA is 50% from our father and 50% from our mother, but that's not exactly true. We get all our mitochondrial DNA from our mothers, because sperm do not contribute any mitochondria when the egg is fertilised. This has applications in forensics etc as well, as mitochnidrial DNA can be used to trace maternal lines. I've noticed that they also like to throw the term 'mitochondrial DNA' randomly into lab scenes on crap shows like CSI and law and order.

    Hey!! :p Don't be picking on Grissom! :D

    That all sounds very interesting Scott and well explained coz even I managed to wrap my head around it. :)

    Aren't mitochondrial dna the little swirly strands?
    NOPE!!!

    *~You're IT Bert!~*

    Hold on to the thread
    The currents will shift
  • Heh. All DNA is 'little swirly strands'. The point here is what part of the cell those strands are found in.

    Basically there are two types of cellular organisms on earth - prokaryotic - which are bacteria and archaea. Simple single celled organisms. Very small, with no real structures inside their cells. Basically everything (DNA, proteins, and other molecules) floats around inside the outer cell membrane.

    The second type are called eukaryotes. This includes all the higher forms of life, including plants, animals and fungi. Eukaryotic cells (like ours) have structures inside them with their own little membranes, like tiny cells within a cell. These structures are called organelles. The defining ones are the nucleus, which contains most of the DNA, and other things like mitochondria, chloroplasts (only in plants) etc. Some of these organelles have their own DNA. The DNA contained in the nucleus is what you inherit in a 50/50 ratio from your parents. There are two copies of each one of your chromosomes in that nucleus. You get one copy from your mother (these are the ones that were present in the egg cell before fertilisation) and one copy from your father (from the sperm). But since the sperm does not contribute any organelles, the DNA in your mitochondria all comes from your mother.

    That's biology 101 for today. I have to go. More later if people are interested.
    It doesn't matter if you're male, female, or confused; black, white, brown, red, green, yellow; gay, lesbian; redneck cop, stoned; ugly; military style, doggy style; fat, rich or poor; vegetarian or cannibal; bum, hippie, virgin; famous or drunk-you're either an asshole or you're not!

    -C Addison
  • JeanieJeanie Posts: 9,446
    Scubascott wrote:
    Heh. All DNA is 'little swirly strands'. The point here is what part of the cell those strands are found in.

    Basically there are two types of cellular organisms on earth - prokaryotic - which are bacteria and archaea. Simple single celled organisms. Very small, with no real structures inside their cells. Basically everything (DNA, proteins, and other molecules) floats around inside the outer cell membrane.

    The second type are called eukaryotes. This includes all the higher forms of life, including plants, animals and fungi. Eukaryotic cells (like ours) have structures inside them with their own little membranes, like tiny cells within a cell. These structures are called organelles. The defining ones are the nucleus, which contains most of the DNA, and other things like mitochondria, chloroplasts (only in plants) etc. Some of these organelles have their own DNA. The DNA contained in the nucleus is what you inherit in a 50/50 ratio from your parents. There are two copies of each one of your chromosomes in that nucleus. You get one copy from your mother (these are the ones that were present in the egg cell before fertilisation) and one copy from your father (from the sperm). But since the sperm does not contribute any organelles, the DNA in your mitochondria all comes from your mother.

    That's biology 101 for today. I have to go. More later if people are interested.

    I'll have to read that several times for it to sink in, but then I have read basically that so many times and it never really sinks in. Mind of a fish! :rolleyes:

    Ok so now I have a really dumb question, well the question may not be dumb but my execution of it probably will be. :o
    My understanding of stem cells is that they can make them or are attempting to make them without that bit in the middle that decides what kind of cell they are in order to make them specifically as the kind of cell that they want. Does that mean that the mytochondria and all the other things in the nucleus like the chromosomes would remain? In which case, by having stem cell therapy you would potentially be recieving some one elses DNA? That probably made no sense at all. :o
    NOPE!!!

    *~You're IT Bert!~*

    Hold on to the thread
    The currents will shift
  • barakabaraka Posts: 1,268
    Subascott, you might the only one interested in this. Seemed to open up a can of worms at the time, although I haven't kept up with the research. There was a great paper in The Scientist about this a few years ago, but I'm too tired to sift through the archives. Very interesting............................

    http://www.nytimes.com/library/national/science/012500sci-mitochondrial-dna.html
    The greatest obstacle to discovery is not ignorance,
    but the illusion of knowledge.
    ~Daniel Boorstin

    Only a life lived for others is worth living.
    ~Albert Einstein
  • AhnimusAhnimus Posts: 10,560
    Jeanie wrote:
    I'll have to read that several times for it to sink in, but then I have read basically that so many times and it never really sinks in. Mind of a fish! :rolleyes:

    Ok so now I have a really dumb question, well the question may not be dumb but my execution of it probably will be. :o
    My understanding of stem cells is that they can make them or are attempting to make them without that bit in the middle that decides what kind of cell they are in order to make them specifically as the kind of cell that they want. Does that mean that the mytochondria and all the other things in the nucleus like the chromosomes would remain? In which case, by having stem cell therapy you would potentially be recieving some one elses DNA? That probably made no sense at all. :o

    I'm pretty sure they replace the nuclear DNA with your own. That was my understanding of how stem cells are created. They incubate an ovary with your DNA instead of the original. The differentiation of stem cells occurs depending on the types of neighbouring cells. Kind of like the way any gene is expressed. The gene doesn't contain an instruction set, but rather it's more complicated. I know that the 'master gene' for a mouse eye can be transmutated into a drosophila (fruit fly) and the drosophila will grow a drosophila eye, instead of a mouse eye, and vise-verca. So the expression of the genes depends on things besides the gene it's self.

    But I'm curios to know the answer to your question about mitochondrial DNA as well. And Scott can correct me on the rest if I'm wrong.
    I necessarily have the passion for writing this, and you have the passion for condemning me; both of us are equally fools, equally the toys of destiny. Your nature is to do harm, mine is to love truth, and to make it public in spite of you. - Voltaire
  • beachdwellerbeachdweller Posts: 1,532
    in the immortal words of Jon Stewart "Go Onnnnnnn!"
    "Music, for me, was fucking heroin." eV (nothing Ed has said is more true for me personally than this quote)

    Stop by:
    http://www.facebook.com/group.php?gid=14678777351&ref=mf
  • JeanieJeanie Posts: 9,446
    Ahnimus wrote:
    I'm pretty sure they replace the nuclear DNA with your own. That was my understanding of how stem cells are created. They incubate an ovary with your DNA instead of the original. The differentiation of stem cells occurs depending on the types of neighbouring cells. Kind of like the way any gene is expressed. The gene doesn't contain an instruction set, but rather it's more complicated. I know that the 'master gene' for a mouse eye can be transmutated into a drosophila (fruit fly) and the drosophila will grow a drosophila eye, instead of a mouse eye, and vise-verca. So the expression of the genes depends on things besides the gene it's self.

    But I'm curios to know the answer to your question about mitochondrial DNA as well. And Scott can correct me on the rest if I'm wrong.

    Thanks Ryan. Can't stop now, but I'll be back. I have more questions. :)
    NOPE!!!

    *~You're IT Bert!~*

    Hold on to the thread
    The currents will shift
  • All this would be a lot easier with pictures. I'm sure there must be some good websites out there that explains all this in layman's terms, but I'll have a crack anyway.

    So - Following on from what I was saying before, mitochondria are like little bacterial cells that float around inside our cells (which are much larger than a bacterial cell). They are separate from the nucleus and contain their own DNA. In fact, they are so much like bacterial cells that the generally accepted theory on how they came to exist in eukaryotic cells is that back in the days of the primordial slime a large single celled critter probably something like an amoeba tried to eat some smaller bacterial cells by engulfing them. This process is called endocytosis. Rather than being destroyed and absorbed however, the bacterial cells survived inside the larger cell. Somewhere along the line a deal was struck where the bacteria were allowed to live in the favourable environment of the larger cell, in return for chemical energy, which they produced in excess to their own requirements. What we now have is the situation where the symbiotic relationship those ancient bacteria and the larger predatory cell has progressed so far that neither can survive without the other, and they are now infact just different parts of the same organism. Cool hey? Plants made an even better deal somewhere along the line. Not only do they have mitochondria cranking out energy, they also have another type of organelle descended from a photosynthetic bacteria. These are called chloroplasts, and they also have their own DNA, just like mitochondria.

    So. . . stem cells. This is a complicated topic, and I need to get back to the lab, but I'll try to explain it just briefly. Ahnimus is kind of correct, but its more complex than that.

    Basically the story is that every cell in your body has all the same information stored in the DNA in its nucleus (except red blood cells, but we won't go there). This information is the same regardless of whether its a muscle cell, liver cell, nerve cell, skin cell etc, and it has all the instructions required to make any type of cell in your body. But, even though all those cells contain the same information, its not possible for say, a skin cell to divide and produce a liver cell. Only special types of cells can divide and develop into other cell types. These are called stem cells.

    There are several kinds of stem cells, but the ones of most interest to researchers are embryonic stem cells. When an egg is fertilised by a sperm, the fertilised egg (called a zygote) begins to divide. So one cell becomes two, which becomes four, which beomes eight, 16, 32, 64 etc etc. For the first few days after fertilisation, these cells have not yet taken on any particular function. There are no skin cells, no hair follicle cells, no pancreatic cells, just these undifferentiated stem cells. So, if you take the embryo during these first few days (I think between 3 and 5 days is the ideal time), you can extract the stem cells, and start growing them in culture. You can then (in theory) manipulate them to differentiate into whatever kind of cell you like. We're not quite there yet, but the hope is that one day we'll be able to grow new livers, hearts, lungs or whatever outside the body by directing the development of stem cell cultures.

    Now, you can get stem cells from a number of sources. There are embryonic stem cells, like I described above, which can only be isolated from an embryo in the very early stages of development. There are also other types of stem cells that can be isolated from placenta and umbilical cord blood, and others that can be isolated from tissue of adults. The difference with these other types compared to embryonic stem cells is that they are limited in the number of other cell types that they can differentiate into.

    So, if you want embryonic stem cells, you need an embryo. One way to get one is to fertilise a human egg with a human sperm in a test tube. This is exactly what happens in IVF. Most of the research done so far has used excess embryos produced for IVF. These embryos would have been destroyed anyway, and are donated with the consent of the couple. Another way to get an embryo is to produce one by cloning. This involves taking an unfertilised egg, sucking the nucleus out, and replacing it with the nucleus of another cell from somewhere else. This effectively replaces the 'identity' of that egg cell with that of the cell that nucleus is taken from. The egg now has a full set of two copies of DNA, and can then be tricked into developing. The neat thing about this is that if say, Jeanie, needed a new liver because she drank too much bundy rum, you could take one of her own ova (egg cells), rip out the nucleus, replace it with the nucleus of another cell from her armpit or somewhere, and hey presto! You've got cloned Jeanie stem cells, genetically identical to her. All you have to do then is tell those cells to differentiate into liver cells, grow up a new liver, and transplant it back into her. Because the new liver is genetically identical to her old one, there will be no issues with rejection.
    It doesn't matter if you're male, female, or confused; black, white, brown, red, green, yellow; gay, lesbian; redneck cop, stoned; ugly; military style, doggy style; fat, rich or poor; vegetarian or cannibal; bum, hippie, virgin; famous or drunk-you're either an asshole or you're not!

    -C Addison
  • Wow, that was a long post, and there's still a lot to explain that I didn't get to. I have to go again, but I'll try get back later. Note that stem cell research is not my field (I'm a microbial ecologist). But I have just marked a stack of third year student assignments on this very topic, so I can try to explain the basics.
    It doesn't matter if you're male, female, or confused; black, white, brown, red, green, yellow; gay, lesbian; redneck cop, stoned; ugly; military style, doggy style; fat, rich or poor; vegetarian or cannibal; bum, hippie, virgin; famous or drunk-you're either an asshole or you're not!

    -C Addison
  • THC wrote:
    the stuff about tracing ancestry is the really cool part. i saw a bit on this on 20/20 the other day. Its interesting though...one of their points was that if you go back say 8 generations...of your own DNA...you'd have something like 24,000 grandparents or something crazy. Which means...our genes..are very much a combination of many...many gene pools...from all over the globe.

    You should read Richard Dawkins 'Anscestor's Tale'. It traces back and attempts to estimate what common anscestors of us and other animal families would be like, and used mDNA and fossil evidence to attempt to date when the anscestor would have existed, while giving lots of insight on how evolution has worked. It's qute interesting, but a bit long and heavy at times. I'm 2/3s of the way done!

    My favorite fact so far: Whale's and Dolphin's closest living relitive (still on land): Hippos!
    "Science has proof without certainty... Religion has certainty without proof"
    -Ashley Montagu
  • JeanieJeanie Posts: 9,446
    Scubascott wrote:
    Wow, that was a long post, and there's still a lot to explain that I didn't get to. I have to go again, but I'll try get back later. Note that stem cell research is not my field (I'm a microbial ecologist). But I have just marked a stack of third year student assignments on this very topic, so I can try to explain the basics.


    Thanks scott. :) I've got a bit of brain strain going on this week, but when I get my shit together I do have some questions if you don't mind? :)
    I think this is very much how I understood it from the stem cell scientist guy whose public lecture I went to but I'm too fuzzy atm to hunt out the details or formulate questions. :o
    NOPE!!!

    *~You're IT Bert!~*

    Hold on to the thread
    The currents will shift
Sign In or Register to comment.